How to
use Sun N1 Grid Engine 6 on the ClustersSun Grid Quick Start
qsub test.sh : submit your job
qstat : check server status
qdel : delete your job
Sun Grid Engine User Manuals are online at
SGE6 (English) and
SGE6 (Japanese).
-caution-
If you made binary files on the Linux server, binary format should be little endian.
Before using the cluster system, check .bashrc and bash_profle, or .cshrc, or .tcshrc.
Example [from R. Muskett]:
Add the following code to your .bash_profile, and source when finished.
#For Sun Grid on the v440 cluster, Solaris 5.9, Bourne Again Shell
. /ijisGrid/SGEEE6/v440/common/settings.sh
PATH=$PATH:$HOME/bin:/usr/local/bin:/usr/openwin/bin:/opt/SUNWspro/bin:/usr/ccs/bin:/usr/ucb
PATH=$PATH:/ijisGrid/SGEEE6/bin/sol-sparc64
PATH=$PATH:/opt/sunstudio11/SUNWspro/bin
LD_LIBRARY_PATH=$LD_LIBRARY_PATH:"/usr/local/lib/sparcv9:/usr/local/lib:/usr/openwin/lib:/usr/lib"
LD_LIBRARY_PATH=$LD_LIBRARY_PATH:":/usr/ccs/lib:/usr/share/lib:/usr/sfw/lib:
/usr/dt/lib:/ijisGrid/SGEEE6/lib/sol-sparc64"
MANPATH=$MANPATH:/ijisGrid/SGEEE6/man
#use export command to export the environment variables
#for csh use setenv command instead of the "." for the "settings.csh" and
#in front of the environment variables
#For Sun Grid on the v20 cluster, Red Hat EL3, Bourne Again Shell
. /sgeinst/V20/common/settings.sh
PATH=$PATH:/sgeinst/bin/lx24-amd64
#use export command to export the PATH variable
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iarc.uaf.edu
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